MSnbase is an R/Bioconductor package for the analysis of quantitative proteomics experiments that use isobaric tagging. It provides an exploratory data analysis framework for reproducible research, allowing raw data import, quality control, visualization, data processing and quantitation. MSnbase allows direct integration of quantitative proteomics data with additional facilities for statistical analysis provided by the Bioconductor project.
Affiliations
University of Cambridge
Citations
APA
Chicago
FWB
Gatto, L., & Lilley, K. S. (2012). MSnbase-an R/Bioconductor package for isobaric tagged mass spectrometry data visualization, processing and quantitation. Bioinformatics, 28(2), 288-289. https://doi.org/10.1093/bioinformatics/btr645 (Original work published 2012)