Chromatin recruitment of activated AMPK drives fasting response genes co-controlled by GR and PPARα

Ratman, Dariusz;Mylka, Viacheslav;Bougarne, Nadia;Pawlak, Michal;De Bosscher, Karolien;et.al.
(2016) Nucleic Acids Research — Vol. 44, n° 22, p. 10539-10553 (2016)

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Authors
  • Ratman, Dariusz
    Author
  • Mylka, Viacheslav
    Author
  • Bougarne, Nadia
    Author
  • Pawlak, Michal
    Author
  • Rider, Mark H.orcid-logoUCLouvain
    Author
  • De Bosscher, Karolien
    Author
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Abstract
Adaptation to fasting involves both Glucocorticoid Receptor (GRα) and Peroxisome Proliferator-Activated Receptor α (PPARα) activation. Given both receptors can physically interact we investigated the possibility of a genome-wide cross-talk between activated GR and PPARα, using ChIP- and RNA-seq in primary hepatocytes. Our data reveal extensive chromatin co-localization of both factors with cooperative induction of genes controlling lipid/glucose metabolism. Key GR/PPAR co-controlled genes switched from transcriptional antagonism to cooperativity when moving from short to prolonged hepatocyte fasting, a phenomenon coinciding with gene promoter recruitment of phosphorylated AMP-activated protein kinase (AMPK) and blocked by its pharmacological inhibition. In vitro interaction studies support trimeric complex formation between GR, PPARα and phospho-AMPK. Long-term fasting in mice showed enhanced phosphorylation of liver AMPK and GRα Ser211. Phospho-AMPK chromatin recruitment at liver target genes, observed upon prolonged fasting in mice, is dampened by refeeding. Taken together, our results identify phospho-AMPK as a molecular switch able to cooperate with nuclear receptors at the chromatin level and reveal a novel adaptation mechanism to prolonged fasting.
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Citations

Ratman, D., Mylka, V., Bougarne, N., Pawlak, M., Caron, S., Hennuyer, N., Paumelle, R., De Cauwer, L., Thommis, J., Rider, M. H., Libert, C., Lievens, S., Tavernier, J., Staels, B., & De Bosscher, K. (2016). Chromatin recruitment of activated AMPK drives fasting response genes co-controlled by GR and PPARα. Nucleic Acids Research, 44(22), 10539-10553. https://doi.org/10.1093/nar/gkw742 (Original work published 2016)