Genetic alterations and MRD refine risk assessment for KMT2A-rearranged B-cell precursor ALL in adults: a GRAALL study.

Kim, Rathana;Bergugnat, Hugo;Pastoret, Cédric;Pasquier, Florence;Clappier, Emmanuelle;et.al.
(2023) Blood — Vol. 142, n° 21, p. 1806-1817 (2023)

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Authors
  • Kim, Rathanaorcid-logo
    Author
  • Bergugnat, Hugoorcid-logo
    Author
  • Pastoret, Cédricorcid-logo
    Author
  • Pasquier, Florence
    Author
  • Straetmans, NicoleUCLouvain
    Author
  • Graux, CarlosUCLouvain
    Author
  • Clappier, Emmanuelleorcid-logo
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Abstract
KMT2A-rearranged (KMT2A-r) B-cell precursor acute lymphoblastic leukemia (BCP-ALL) is widely recognized as a high-risk leukemia in both children and adults. However, there is a paucity of data on adults treated in recent protocols, and the optimal treatment strategy for these patients is still a matter of debate. In this study, we set out to refine the prognosis of adult KMT2A-r BCP-ALL treated with modern chemotherapy regimen and investigate the prognostic impact of comutations and minimal residual disease (MRD). Of 1091 adult patients with Philadelphia-negative BCP-ALL enrolled in 3 consecutive trials from the Group for Research on Adult Acute Lymphoblastic Leukemia (GRAALL), 141 (12.9%) had KMT2A-r, with 5-year cumulative incidence of relapse (CIR) and overall survival (OS) rates of 40.7% and 53.3%, respectively. Molecular profiling highlighted a low mutational burden in this subtype, reminiscent of infant BCP-ALL. However, the presence of TP53 and/or IKZF1 alterations defined a subset of patients with significantly poorer CIR (69.3% vs 36.2%; P = .001) and OS (28.1% vs 60.7%; P = .006) rates. Next, we analyzed the prognostic implication of MRD measured after induction and first consolidation, using both immunoglobulin (IG) or T-cell receptor (TR) gene rearrangements and KMT2A genomic fusion as markers. In approximately one-third of patients, IG/TR rearrangements were absent or displayed clonal evolution during the disease course, compromising MRD monitoring. In contrast, KMT2A-based MRD was highly reliable and strongly associated with outcome, with early good responders having an excellent outcome (3-year CIR, 7.1%; OS, 92.9%). Altogether, our study reveals striking heterogeneity in outcomes within adults with KMT2A-r BCP-ALL and provides new biomarkers to guide risk-based therapeutic stratification.
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Kim, R., Bergugnat, H., Pastoret, C., Pasquier, F., Raffoux, E., Larcher, L., Passet, M., Grardel, N., Delabesse, E., Kubetzko, S., Caye-Eude, A., Meyer, C., Marschalek, R., Lafage-Pochitaloff, M., Thiebaut-Bertrand, A., Balsat, M., Escoffre-Barbe, M., Blum, S., Baumann, M., et al. (2023). Genetic alterations and MRD refine risk assessment for KMT2A-rearranged B-cell precursor ALL in adults: a GRAALL study. Blood, 142(21), 1806-1817. https://doi.org/10.1182/blood.2023021501 (Original work published 2023)